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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2671093_2671626_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2671093 - 2671626

Intron Length:
534

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGCGTACG

5'SS Class:
major

3'SS Sequence:
TACTGTCTGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
CTGTTCTTATCC

Flanking Amino Acid:
WLRPENSDNRVFFYKGELHI

Intron Amino Acid Position:
167

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72
0.52
1.1
62.5
43.7

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
68.9
0.43
1.1
61.8
44.2

Minor 5ss
29.1
-2.4
2.7
25.8
36.4

Minor BPS
62.9
0.39
1.6
69.29
42.7

Associated Gene:

Gene:
ECD

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2669445 - 2679745
10301