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Intron Name: Anas_platyrhynchos_platyrhynchos_6_26943280_26944065_R

Intron Information:

Intron Rank:

144314

Intron Class:

major

Intron Phase:

Intron Coordinates:

26943280 - 26944065

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CATCTCTCATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

78.6

0.64

0.8

76.3

32.3

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

47.3

-0.2

1.8

56.95

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046025

26942853 - 26997721

54869