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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27020907_27021919_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27020907 - 27021919

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TGATAATTACAT

Flanking Amino Acid:

NAVKVFKEIGVFSQTKQCRD

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

73.9

0.59

30.2

Major PPT

76.1

0.59

72.5

42.4

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

45.4

-0.2

2.1

65.73

43.6

Associated Gene:

Gene:

GPAM

Ensembl Gene ID:

ENSAPLG00000001995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032124

27020513 - 27047637

27125

ENSAPLT00000002280

27020513 - 27067458

46946