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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27021979_27022092_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27021979 - 27022092

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTCAA

5'SS Class:

major

3'SS Sequence:

TACTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GTTTGTTTATCT

Flanking Amino Acid:

SRTEKNVAVYAESATYSHVK

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

68.6

37.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

85.9

0.81

0.8

80.8

30.8

Minor 5ss

39.8

-1.1

2.8

46.1

44.4

Minor BPS

58.6

0.35

80.3

41.9

Associated Gene:

Gene:

GPAM

Ensembl Gene ID:

ENSAPLG00000001995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032124

27020513 - 27047637

27125

ENSAPLT00000002280

27020513 - 27067458

46946