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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27022941_27025933_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27022941 - 27025933

Intron Length:

2993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCAAATTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

ACCTATTTAACC

Flanking Amino Acid:

IQYGILLVAEQDDQEDVSPG

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

33.3

Major BPS

79.5

0.73

0.9

36.9

Major PPT

67.4

0.39

1.1

69.8

39.4

Minor 5ss

37.3

-1.4

47.8

47.6

Minor BPS

0.36

1.5

65.19

40.7

Associated Gene:

Gene:

GPAM

Ensembl Gene ID:

ENSAPLG00000001995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032124

27020513 - 27047637

27125

ENSAPLT00000002280

27020513 - 27067458

46946