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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27026012_27027425_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27026012 - 27027425

Intron Length:

1414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTGTTATTT

Flanking Amino Acid:

LLSNEFTISLPCQVIYQVCH

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.9

0.9

0.7

84.7

30.1

Minor 5ss

-1.6

47.1

42.6

Minor BPS

52.1

0.14

2.2

77.4

39.8

Associated Gene:

Gene:

GPAM

Ensembl Gene ID:

ENSAPLG00000001995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032124

27020513 - 27047637

27125

ENSAPLT00000002280

27020513 - 27067458

46946