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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27031531_27033558_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27031531 - 27033558

Intron Length:

2028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

TTTCTCTTAATA

Flanking Amino Acid:

VDFAQPFSLKEYVNSQSQKP

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

62.4

0.31

32.1

Major PPT

80.2

0.68

0.8

77.7

29.6

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

0.94

84.43

28.5

Associated Gene:

Gene:

GPAM

Ensembl Gene ID:

ENSAPLG00000001995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032124

27020513 - 27047637

27125

ENSAPLT00000002280

27020513 - 27067458

46946