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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27036630_27037594_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27036630 - 27037594

Intron Length:

965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAG

U12 Branch Point Sequence:

CTCCTCTCCATA

Flanking Amino Acid:

QIEMVKAATEMNLPLIFLPV

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

64.3

0.36

1.6

41.2

Major PPT

73.1

0.52

0.7

68.2

25.5

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

-0.4

1.9

51.84

40.8

Associated Gene:

Gene:

GPAM

Ensembl Gene ID:

ENSAPLG00000001995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032124

27020513 - 27047637

27125

ENSAPLT00000002280

27020513 - 27067458

46946