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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27037692_27038549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27037692 - 27038549

Intron Length:

858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

GTTCTTTGAATT

Flanking Amino Acid:

MVANVSPALIRLTGWVLLKL

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

74.6

0.61

1.4

34.5

Major PPT

86.1

0.81

0.8

83.9

31.1

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

59.6

0.38

1.4

74.62

36.1

Associated Gene:

Gene:

GPAM

Ensembl Gene ID:

ENSAPLG00000001995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032124

27020513 - 27047637

27125

ENSAPLT00000002280

27020513 - 27067458

46946