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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27040030_27042324_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27040030 - 27042324

Intron Length:

2295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAG

5'SS Class:

major

3'SS Sequence:

CATATTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCATAT

U12 Branch Point Sequence:

TGCTTCATATTT

Flanking Amino Acid:

NVIYINETHTRYRGWLARRL

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

38.3

Major BPS

74.2

0.6

69.3

38.4

Major PPT

78.3

0.64

0.8

73.3

36.7

Minor 5ss

35.4

-1.7

3.3

45.9

49.3

Minor BPS

49.3

0.02

1.9

68.9

42.4

Associated Gene:

Gene:

GPAM

Ensembl Gene ID:

ENSAPLG00000001995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032124

27020513 - 27047637

27125

ENSAPLT00000002280

27020513 - 27067458

46946