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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27042399_27045367_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27042399 - 27045367

Intron Length:

2969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTTTTTACAG

Flanking Amino Acid:

CCYVCTPQSRDNFFNSSIPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.7

40.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

88.6

0.87

0.7

83.2

31.9

Minor 5ss

32.4

-2

2.9

32.3

Minor BPS

51.1

-0.1

1.8

59.4

Associated Gene:

Gene:

GPAM

Ensembl Gene ID:

ENSAPLG00000001995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032124

27020513 - 27047637

27125

ENSAPLT00000002280

27020513 - 27067458

46946