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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2705239_2708504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2705239 - 2708504

Intron Length:

3266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

ATTTTCACTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAATA

Flanking Amino Acid:

AEESKLEQIKKWAEKLDQLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

69.9

41.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.2

0.61

0.8

71.3

33.8

Minor 5ss

41.4

-1

2.9

52.4

38.7

Minor BPS

56.4

0.2

1.9

74.95

35.9

Associated Gene:

Gene:

P4HA1

Ensembl Gene ID:

ENSAPLG00000009284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009702

2704157 - 2734753

30597

ENSAPLT00000039172

2704122 - 2730828

26707

ENSAPLT00000033777

2704122 - 2730828

26707