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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2708657_2711028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2708657 - 2711028

Intron Length:

2372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTCCCTGTCATT

Flanking Amino Acid:

ESLVLKDMSDGFISNMTIQR

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

72.5

0.56

1.2

39.9

Major PPT

77.4

0.62

0.9

73.6

35.6

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

45.6

-0.2

2.3

68.31

43.6

Associated Gene:

Gene:

P4HA1

Ensembl Gene ID:

ENSAPLG00000009284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039172

2704122 - 2730828

26707

ENSAPLT00000033777

2704122 - 2730828

26707

ENSAPLT00000009702

2704157 - 2734753

30597