Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_27133537_27134742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27133537 - 27134742

Intron Length:

1206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TGAAATGTAATT

Flanking Amino Acid:

PEAIVYIVNKADISVVICDK

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

93.3

21.1

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

87.8

0.85

0.6

84.9

22.8

Minor 5ss

-1

59.7

44.8

Minor BPS

45.2

-0.2

2.1

63.21

41.1

Associated Gene:

Gene:

ACSL5

Ensembl Gene ID:

ENSAPLG00000014661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034653

27122179 - 27142200

20022

ENSAPLT00000015355

27122179 - 27142200

20022