Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_27138077_27138152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27138077 - 27138152

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

AATTCACTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTAATTCACT

Flanking Amino Acid:

LDRIIFKKVQETMGGRVRIM

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.47

0.9

37.2

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

51.1

0.11

2.2

78.09

43.9

Associated Gene:

Gene:

ACSL5

Ensembl Gene ID:

ENSAPLG00000014661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034653

27122179 - 27142200

20022

ENSAPLT00000015355

27122179 - 27142200

20022