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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2713981_2714716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2713981 - 2714716

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

TCCTTTTCAACA

Flanking Amino Acid:

MMLTKRLLELDPEHQRANGN

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.9

35.2

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

79.8

0.67

0.8

76.7

30.6

Minor 5ss

40.7

-1

2.5

42.1

44.8

Minor BPS

59.7

0.3

1.5

66.33

40.9

Associated Gene:

Gene:

P4HA1

Ensembl Gene ID:

ENSAPLG00000009284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039172

2704122 - 2730828

26707

ENSAPLT00000033777

2704122 - 2730828

26707

ENSAPLT00000009702

2704157 - 2734753

30597