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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27141184_27141532_F


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
27141184 - 27141532

Intron Length:
349

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCA|GTGAGTTTT

5'SS Class:
major

3'SS Sequence:
CTCTCTCTTCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GCTTTAC

U12 Branch Point Sequence:
TTTACCCACACT

Flanking Amino Acid:
GSYEDICKNSAVKKAILEDM

Intron Amino Acid Position:
614

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1
78
32.5

Major BPS
56.2
0.16
1.3
51.3
43.9

Major PPT
80.4
0.68
0.7
73
31.9

Minor 5ss
42.9
-0.8
3
63.8
41.6

Minor BPS
47.5
-0.1
2.4
77.43
44.6

Associated Gene:

Gene:
ACSL5

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

27122179 - 27142200
20022

27122179 - 27142200
20022