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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2714908_2715426_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2714908 - 2715426

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAGTGG

5'SS Class:

major

3'SS Sequence:

ATCTTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTCCTGATTA

Flanking Amino Acid:

MLCRGEGLKMTPRRQKRLFC

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

56.4

43.2

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

80.8

0.69

0.9

77.4

36.3

Minor 5ss

35.6

-1.6

3.3

43.6

Minor BPS

61.3

0.35

1.7

73.26

38.6

Associated Gene:

Gene:

P4HA1

Ensembl Gene ID:

ENSAPLG00000009284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039172

2704122 - 2730828

26707

ENSAPLT00000033777

2704122 - 2730828

26707

ENSAPLT00000009702

2704157 - 2734753

30597