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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2715604_2718249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2715604 - 2718249

Intron Length:

2646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATGCA

5'SS Class:

major

3'SS Sequence:

GTTCGCTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GTTCGCTTCACA

Flanking Amino Acid:

ETVKELAKPRLRRATISNPI

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

68.4

36.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

75.2

0.57

0.9

68.2

37.5

Minor 5ss

31.9

-2.1

3.2

32.7

42.2

Minor BPS

51.7

0.05

2.2

69.6

42.5

Associated Gene:

Gene:

P4HA1

Ensembl Gene ID:

ENSAPLG00000009284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039172

2704122 - 2730828

26707