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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2715604_2719430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2715604 - 2719430

Intron Length:

3827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATGCA

5'SS Class:

major

3'SS Sequence:

TCTCTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGGTAA

U12 Branch Point Sequence:

AGGTGGGTAAGC

Flanking Amino Acid:

ETVKELAKPRLSRATVHDPE

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

68.4

36.8

Major BPS

42.9

-0.4

1.5

35.1

43.5

Major PPT

87.5

0.84

0.6

84.2

23.8

Minor 5ss

31.9

-2.1

3.2

32.7

42.2

Minor BPS

34.1

-1.2

2.7

44.55

43.8

Associated Gene:

Gene:

P4HA1

Ensembl Gene ID:

ENSAPLG00000009284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033777

2704122 - 2730828

26707

ENSAPLT00000009702

2704157 - 2734753

30597