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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27166143_27171262_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27166143 - 27171262

Intron Length:

5120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTTGT

5'SS Class:

major

3'SS Sequence:

TTTTACTTGCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TCTTCCTTATTT

Flanking Amino Acid:

EKQLEEARELLEQMELEVRE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

71.6

40.8

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

75.3

0.57

70.2

Minor 5ss

-1

3.1

55.6

43.9

Minor BPS

75.3

0.87

1.5

87.57

38.6

Associated Gene:

Gene:

VTI1A

Ensembl Gene ID:

ENSAPLG00000014465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047111

27157951 - 27422926

264976

ENSAPLT00000015081

27158900 - 27422926

264027