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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27212747_27223998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27212747 - 27223998

Intron Length:

11252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

TTTTCTTTTTCA

Flanking Amino Acid:

GDDGNSSENQRAHLLDNTER

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.9

Major BPS

0.27

1.3

53.3

44.2

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

-0.2

3.6

78.96

37.6

Associated Gene:

Gene:

VTI1A

Ensembl Gene ID:

ENSAPLG00000014465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047111

27157951 - 27422926

264976