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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27324742_27422832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27324742 - 27422832

Intron Length:

98091

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTCTTTTTGTCT

Flanking Amino Acid:

SSRILTGMLRRIIQNRILIV

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

93.4

0.98

0.7

92.3

26.6

Minor 5ss

-2.2

3.2

39.6

45.9

Minor BPS

-0.2

3.4

77.67

39.7

Associated Gene:

Gene:

VTI1A

Ensembl Gene ID:

ENSAPLG00000014465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047111

27157951 - 27422926

264976

ENSAPLT00000015081

27158900 - 27422926

264027