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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2734169_2734682_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2734169 - 2734682

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TATGTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

GTACCTTTATGT

Flanking Amino Acid:

ACPVLVGNKWVSNKWLHERG

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

83.3

0.75

0.9

77.3

36.6

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

0.01

1.9

66.97

43.6

Associated Gene:

Gene:

P4HA1

Ensembl Gene ID:

ENSAPLG00000009284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009702

2704157 - 2734753

30597