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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2742294_2746213_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2742294 - 2746213

Intron Length:

3920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

GCTTTCCTAACG

Flanking Amino Acid:

NGVCQYRCRYGKAPMPRPHY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

0.55

71.8

31.4

Major PPT

88.6

0.87

0.6

87.8

22.3

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

59.5

0.16

1.8

64.41

43.3

Associated Gene:

Gene:

PLA2G12B

Ensembl Gene ID:

ENSAPLG00000009178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033783

2741029 - 2749144

8116

ENSAPLT00000009556

2742059 - 2749144

7086