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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27637363_27639541_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27637363 - 27639541

Intron Length:

2179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TCAACAATAACA

Flanking Amino Acid:

HLPADVDPKTGIPRPPHPPD

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

84.9

0.79

0.7

80.1

25.2

Minor 5ss

30.7

-2.2

3.4

40.1

Minor BPS

49.4

-0

1.9

63.69

41.7

Associated Gene:

Gene:

TCF7L2

Ensembl Gene ID:

ENSAPLG00000014253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037887

27488747 - 27665162

176416

ENSAPLT00000017809

27488747 - 27665162

176416

ENSAPLT00000014867

27488747 - 27657894

169148

ENSAPLT00000041167

27488747 - 27665162

176416