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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2765787_2768527_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2765787 - 2768527

Intron Length:

2741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GTGTGCTGATTT

Flanking Amino Acid:

TLGSDGKTCEEIEGCHNNNG

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

84.7

28.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

80.9

0.7

0.8

76.8

31.9

Minor 5ss

37.2

-1.4

3.5

49.2

Minor BPS

46.4

-0.2

2.1

65.34

45.4

Associated Gene:

Gene:

OIT3

Ensembl Gene ID:

ENSAPLG00000009116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009491

2754120 - 2776259

22140