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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27677_31100_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27677 - 31100

Intron Length:

3424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCACTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTCAACTAACA

Flanking Amino Acid:

SRLFQGQRAAMLSLLRYNAN

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.8

34.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

73.5

0.53

0.9

73.8

36.5

Minor 5ss

44.3

-0.6

2.9

62.8

41.9

Minor BPS

49.6

-0

2.1

72.64

38.1

Associated Gene:

Gene:

CHUK

Ensembl Gene ID:

ENSAPLG00000011503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039931

12183 - 46227

34045

ENSAPLT00000037450

14485 - 44896

30412

ENSAPLT00000012207

12183 - 45972

33790