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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27813841_27815818_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27813841 - 27815818

Intron Length:

1978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATCTCTG

5'SS Class:

weak_major

3'SS Sequence:

GCCACTGGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGGAT

U12 Branch Point Sequence:

GTGTGCAGAGCC

Flanking Amino Acid:

IGQVSALGYLYFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.3

1.2

45.6

Major BPS

58.9

0.22

1.5

59.3

47.1

Major PPT

45.6

-0.2

1.2

39.7

38.2

Minor 5ss

54.2

0.14

2.4

67.1

Minor BPS

40.8

-0.7

2.2

53.23

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029892

27808506 - 27815827

7322