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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27898517_27899514_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27898517 - 27899514

Intron Length:

998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTCCAG

5'SS Class:

major

3'SS Sequence:

GTTCTTACCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CCGTTCTTACCC

Flanking Amino Acid:

EFFGYSDTQQDDPCSSDPCK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.1

48.8

43.4

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

70.9

0.47

0.9

63.2

38.2

Minor 5ss

30.8

-2.2

3.2

38.3

46.7

Minor BPS

56.3

0.18

1.7

60.8

45.1

Associated Gene:

Gene:

HABP2

Ensembl Gene ID:

ENSAPLG00000013955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014575

27887244 - 27907074

19831

ENSAPLT00000037765

27887244 - 27908465

21222