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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27899626_27900099_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27899626 - 27900099

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

AAGTGTTTATCT

Flanking Amino Acid:

KPYTGTTCEKVKDMCVENSC

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

79.8

35.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

75.5

0.57

71.5

38.3

Minor 5ss

41.1

-1

2.9

57.5

46.8

Minor BPS

49.2

0.02

67.04

Associated Gene:

Gene:

HABP2

Ensembl Gene ID:

ENSAPLG00000013955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037765

27887244 - 27908465

21222

ENSAPLT00000014575

27887244 - 27907074

19831