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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27900217_27900524_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27900217 - 27900524

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCACA

5'SS Class:

major

3'SS Sequence:

TCCACCTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TCCACCTTGACA

Flanking Amino Acid:

HPYKLPDCHRASSQCRPNPC

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

38.8

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

68.7

0.42

63.9

36.7

Minor 5ss

34.7

-1.7

2.8

41.9

44.5

Minor BPS

69.5

0.61

1.3

71.1

41.2

Associated Gene:

Gene:

HABP2

Ensembl Gene ID:

ENSAPLG00000013955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037765

27887244 - 27908465

21222

ENSAPLT00000014575

27887244 - 27907074

19831