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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27900645_27901272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27900645 - 27901272

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACGTCAC

5'SS Class:

major

3'SS Sequence:

TGTCTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATATCA

Flanking Amino Acid:

EPFRGRFCEIGLDDCYEEDS

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

63.8

42.6

Major BPS

100

1.24

0.5

100

Major PPT

0.81

0.8

80.1

Minor 5ss

33.9

-1.8

3.1

44.6

43.3

Minor BPS

62.4

0.39

1.9

79.95

Associated Gene:

Gene:

HABP2

Ensembl Gene ID:

ENSAPLG00000013955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037765

27887244 - 27908465

21222

ENSAPLT00000014575

27887244 - 27907074

19831