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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27901964_27902096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27901964 - 27902096

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTAA

5'SS Class:

major

3'SS Sequence:

TCTTCCAACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATCTCTGGATT

Flanking Amino Acid:

FCDISPCSGTAQESQWTTDS

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

65.2

37.1

Major BPS

75.9

0.64

66.1

40.5

Major PPT

71.7

0.49

0.9

66.1

33.5

Minor 5ss

-1.8

3.6

45.7

49.5

Minor BPS

57.2

0.31

1.4

73.8

36.8

Associated Gene:

Gene:

HABP2

Ensembl Gene ID:

ENSAPLG00000013955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037765

27887244 - 27908465

21222

ENSAPLT00000014575

27887244 - 27907074

19831