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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27902344_27903288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27902344 - 27903288

Intron Length:

945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

CTCTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTTACTTTACTC

Flanking Amino Acid:

CWVLTAGHCLTELAEKFQVA

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.3

69.8

39.5

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

91.2

0.93

0.6

87.3

23.1

Minor 5ss

35.3

-1.7

3.5

48.8

40.9

Minor BPS

0.42

1.6

74.57

36.6

Associated Gene:

Gene:

HABP2

Ensembl Gene ID:

ENSAPLG00000013955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037765

27887244 - 27908465

21222

ENSAPLT00000014575

27887244 - 27907074

19831