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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27903432_27903804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27903432 - 27903804

Intron Length:

373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

ATCTTGTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATACTTTTATCT

Flanking Amino Acid:

EKGDVPYNDIALLKLKPVDG

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

65.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

78.7

0.65

0.9

69.7

Minor 5ss

33.4

-1.9

3.1

41.2

38.9

Minor BPS

56.7

0.29

1.5

72.22

38.6

Associated Gene:

Gene:

HABP2

Ensembl Gene ID:

ENSAPLG00000013955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037765

27887244 - 27908465

21222

ENSAPLT00000014575

27887244 - 27907074

19831