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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27903940_27905313_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27903940 - 27905313

Intron Length:

1374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GTACATCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

TTTTGGTGTACA

Flanking Amino Acid:

FISGWGATETDDISHQLLDA

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.5

39.1

Major BPS

67.6

0.44

1.2

Major PPT

70.3

0.46

62.6

39.1

Minor 5ss

-2.2

3.3

39.7

46.3

Minor BPS

43.7

-0.5

2.7

67.99

44.1

Associated Gene:

Gene:

HABP2

Ensembl Gene ID:

ENSAPLG00000013955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037765

27887244 - 27908465

21222

ENSAPLT00000014575

27887244 - 27907074

19831