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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27905460_27906362_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27905460 - 27906362

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTTGC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTCTTATTA

Flanking Amino Acid:

LRRPRADSCQGDSGGPLTCV

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.3

65.8

41.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

84.9

0.79

0.7

86.5

26.2

Minor 5ss

-0.9

2.5

53.4

43.7

Minor BPS

73.2

0.72

1.5

82.59

32.6

Associated Gene:

Gene:

HABP2

Ensembl Gene ID:

ENSAPLG00000013955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037765

27887244 - 27908465

21222

ENSAPLT00000014575

27887244 - 27907074

19831