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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27906552_27907032_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

27906552 - 27907032

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTAAAT

5'SS Class:

major

3'SS Sequence:

TGTATTCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TGCTTTTGTATT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

75.3

33.9

Major BPS

71.6

0.54

33.1

Major PPT

75.6

0.58

0.8

73.9

36.7

Minor 5ss

41.3

-1

2.9

57.7

46.5

Minor BPS

47.4

-0.1

1.7

64.29

41.1

Associated Gene:

Gene:

HABP2

Ensembl Gene ID:

ENSAPLG00000013955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014575

27887244 - 27907074

19831