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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27906562_27907430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27906562 - 27907430

Intron Length:

869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAACAGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTTTTTCAACA

Flanking Amino Acid:

QVKRRKMQLYKI*

Intron Amino Acid Position:

1596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

Major BPS

76.9

0.67

66.3

40.4

Major PPT

87.7

0.85

0.8

85.4

27.8

Minor 5ss

39.8

-1.1

48.3

42.1

Minor BPS

72.9

0.71

1.4

31.4

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595