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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27908884_27909129_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27908884 - 27909129

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTCATTCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

GTATGTTTCATT

Flanking Amino Acid:

AKQAYKLQSDVKYKSDLNWL

Intron Amino Acid Position:

1514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

82.7

29.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

78.1

0.63

0.8

77.2

31.4

Minor 5ss

38.4

-1.3

2.7

48.5

40.3

Minor BPS

48.1

-0

2.1

68.89

42.7

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014153

27906555 - 27951149

44595

ENSAPLT00000047647

27904606 - 27951149

46544