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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27909442_27910101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27909442 - 27910101

Intron Length:

660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

ACATCTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTCCTTTACA

Flanking Amino Acid:

AKASREIASDYKYRETFLRG

Intron Amino Acid Position:

1410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

86.6

28.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

73.5

0.53

0.9

66.5

34.7

Minor 5ss

41.8

-0.9

3.2

63.2

41.1

Minor BPS

83.6

1.05

1.4

91.85

28.4

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595