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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27915243_27916880_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27915243 - 27916880

Intron Length:

1638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTTGA

5'SS Class:

major

3'SS Sequence:

TTTTTATTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCTTTTTTATTT

Flanking Amino Acid:

ARASREIASDYQYKYNFVME

Intron Amino Acid Position:

1167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

73.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.2

0.9

0.6

89.7

25.5

Minor 5ss

36.5

-1.5

2.9

44.7

43.5

Minor BPS

57.3

0.31

1.6

70.13

42.3

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014153

27906555 - 27951149

44595

ENSAPLT00000047647

27904606 - 27951149

46544