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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27916989_27917334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27916989 - 27917334

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTACTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CCTTTCCTACTT

Flanking Amino Acid:

ARINAANLSDAKYRESWHNL

Intron Amino Acid Position:

1131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

77.5

37.2

Major BPS

73.1

0.58

79.6

29.1

Major PPT

80.4

0.68

0.7

78.9

28.3

Minor 5ss

37.6

-1.4

3.1

54.2

42.8

Minor BPS

48.5

-0

67.26

44.4

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595