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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27917440_27918229_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27917440 - 27918229

Intron Length:

790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCTCT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTTTTTTGATC

Flanking Amino Acid:

AKFSNMIANERLYKAAGEDS

Intron Amino Acid Position:

1096

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.3

40.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

80.7

0.69

0.8

73.5

36.4

Minor 5ss

45.1

-0.5

3.2

65.3

46.1

Minor BPS

0.55

1.1

72.05

33.8

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595