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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27923392_27925190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27923392 - 27925190

Intron Length:

1799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

TGTTACTGAAAC

Flanking Amino Acid:

ARISYNQAVDRLYKEHGESV

Intron Amino Acid Position:

853

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.1

24.7

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

89.1

0.88

0.7

84.2

30.7

Minor 5ss

44.3

-0.6

2.9

62.8

Minor BPS

57.9

0.23

1.8

71.18

38.9

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595