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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27927545_27928739_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27927545 - 27928739

Intron Length:

1195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATGAA

U12 Branch Point Sequence:

TGAACACCAACA

Flanking Amino Acid:

AKWAYGLQSDNRYRADLNWM

Intron Amino Acid Position:

785

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

73.6

Major BPS

57.7

0.19

1.3

51.7

43.9

Major PPT

0.83

0.8

88.4

28.7

Minor 5ss

36.9

-1.5

2.9

47.3

41.1

Minor BPS

43.6

-0.4

2.1

57.09

40.9

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595