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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27930056_27930894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27930056 - 27930894

Intron Length:

839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TGTTTGCTAACC

Flanking Amino Acid:

QSDKNLVLTWVAYRSGKEQF

Intron Amino Acid Position:

610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.1

37.9

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

0.47

1.1

68.1

42.3

Minor 5ss

31.4

-2.1

3.6

39.6

45.9

Minor BPS

50.3

-0

2.3

71.44

39.6

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014153

27906555 - 27951149

44595