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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27931718_27933945_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27931718 - 27933945

Intron Length:

2228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TAATTTGATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

CCTGCTTTAATT

Flanking Amino Acid:

AKNVGDLVSEKKYRQKVDAL

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

66.8

0.38

59.4

45.9

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

66.8

0.61

1.4

74.65

43.4

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595