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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27934456_27934957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27934456 - 27934957

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTATTTTCATT

Flanking Amino Acid:

ASDVAKMSSEIAYKKDFEES

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.4

23.9

Major BPS

100

1.24

0.5

100

Major PPT

80.4

0.68

0.8

72.8

37.5

Minor 5ss

41.2

-1

57.8

46.8

Minor BPS

51.6

0.13

1.8

71.2

40.9

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595